MacDonald Lab

Publications

Investigating Post-translational Modifications in Neuropsychiatric Disease: The Next Frontier in Human Post-mortem Brain Research

Grubisha MJ, Sweet RA, MacDonald ML. Investigating Post-translational Modifications in Neuropsychiatric Disease: The Next Frontier in Human Post-mortem Brain Research. Front Mol Neurosci. 2021 Jul 16;14:689495. doi: 10.3389/fnmol.2021.689495. PMID: 34335181; PMCID: PMC8322442.

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Cell-type and subcellular compartment-specific APEX2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum

Dumrongprechachan V, Salisbury RB, Soto G, Kumar M, MacDonald ML, Kozorovitskiy Y. Cell-type and subcellular compartment-specific APEX2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum. Nat Commun. 2021 Aug 11;12(1):4855. doi: 10.1038/s41467-021-25144-y. PMID: 34381044; PMCID: PMC8357913.

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Fingolimod mitigates synaptic deficits and psychosis-like behavior in APP/PSEN1 mice

Krivinko JM, Erickson SL, MacDonald ML, Garver ME, Sweet RA. Fingolimod mitigates synaptic deficits and psychosis-like behavior in APP/PSEN1 mice. Alzheimers Dement (N Y). 2022 Aug 22;8(1):e12324. doi: 10.1002/trc2.12324. PMID: 36016832; PMCID: PMC9395154.

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Dynamic proteomic and phosphoproteomic atlas of corticostriatal axons in neurodevelopment

Dumrongprechachan V, Salisbury RB, Butler L, MacDonald ML, Kozorovitskiy Y. Dynamic proteomic and phosphoproteomic atlas of corticostriatal axons in neurodevelopment. Elife. 2022 Oct 14;11:e78847. doi: 10.7554/eLife.78847. PMID: 36239373; PMCID: PMC9629834.

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Altered Levels of Visinin-Like Protein 1 Correspond to Regional Neuronal Loss in Alzheimer Disease and Frontotemporal Lobar Degeneration

Kirkwood CM, MacDonald ML, Schempf TA, Vatsavayi AV, Ikonomovic MD, Koppel JL, Ding Y, Sun M, Kofler JK, Lopez OL, Yates NA, Sweet RA. Altered Levels of Visinin-Like Protein 1 Correspond to Regional Neuronal Loss in Alzheimer Disease and Frontotemporal Lobar Degeneration. J Neuropathol Exp Neurol. 2016 Jan 14 75(2):175-82. PMID: 26769253.

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FastGGM: An Efficient Algorithm for the Inference of Gaussian Graphical Model in Biological Networks

Wang T, Zhao R, Zhou Fang, Ding Y, MacDonald ML, Sweet R, Chen W#. Fast GGM: An efficient algorithm for the inference of Gaussian graphical model. Plos Computational Biology. 2016 Feb 12(2): e1004755. PMID: 26872036.

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Loss of Microtubule-Associated Protein 2 Immunoreactivity Linked to Dendritic Spine Loss in Schizophrenia

Shelton MA, Newman JT, Gu H, Sampson AR, Fish KN, MacDonald ML, Moyer CE, DiBitetto JV, Dorph-Petersen KA, Penzes P, Lewis DA, Sweet RA. Loss of Microtubule-Associated Protein 2 Immunoreactivity Linked to Dendritic Spine Loss in Schizophrenia. Biol Psychiatry. 2015 Sept 78:374-385. PMID: 25818630.

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Altered glutamate protein co-expression network topology linked to spine loss in the auditory cortex of schizophrenia. Biol Psychiatry.

MacDonald ML, Ding Y, Newman J, Hemby S, Penzes P, Lewis DA, Yates NA, Sweet RA. Altered glutamate protein co-expression network topology linked to spine loss in the auditory cortex of schizophrenia. Biol Psychiatry. 2015 Jun 77:959-968. PMID: 25433904.

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Large-scale generation of human iPSC-derived neural stem cells/early neural progenitor cells and their neuronal differentiation.

D'Aiuto L, Zhi Y, Kumar Das D, Wilcox MR, Johnson JW, McClain L, MacDonald ML, Di Maio R, Schurdak ME, Piazza P, Viggiano L, Sweet R, Kinchington PR, Bhattacharjee AG, Yolken R, Nimgaonkar VL. Large-scale generation of human iPSC-derived neural stem cells/early neural progenitor cells and their neuronal differentiation. Organogenesis. 2014; 10:365-377. PMID: 25629202.

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Src kinase hypoactivity as an underlying mechanism for postreceptor NMDA receptor hypofunction in schizophrenia. Molecular Psychiatry.

Banerjee A, Wang HY, Borgmann-Winter K, Stucky A, Kvasic J, MacDonald ML, Talbot K, Hemby S, Siegel S, Egbujo D, Arnold SE, Sleiman P, Chang X, Hakonarson H, Gur R, Hahn CG. Src kinase hypoactivity as an underlying mechanism for postreceptor NMDA receptor hypofunction in schizophrenia. Molecular Psychiatry. 2014 Oct 21 20(9):1091-100. PMID: 25330739.

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Biochemical Fractionation and Stable Isotope Dilution Liquid Chromatography-mass Spectrometry for Targeted and Microdomain-specific Protein Quantification in Human Postmortem Brain Tissue.

MacDonald ML, Ciccimaro E, Prakash A, Banerjee A, Seeholzer SH, Blair IA, Hahn CG. Biochemical Fractionation and Stable Isotope Dilution Liquid Chromatography-mass Spectrometry for Targeted and Microdomain-specific Protein Quantification in Human Postmortem Brain Tissue. Mol Cell Proteomics. 2012 Dec 11(12):1670-81. PMID: 22942359.

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The Post-Synaptic Density of Human Postmortem Brain Tissues: An Experimental Study Paradigm for Neuropsychiatric Illnesses.

Hahn CG, Banerjee A*, MacDonald ML*, Cho DS, Kamins J, Nie J, Borgmann-Winter KE, Grosser T, Pizarro A, Ciccimaro E, Arnold SE, Wang HY, Blair IA. The Post-Synaptic Density of Human Postmortem Brain Tissues: An Experimental Study Paradigm for Neuropsychiatric Illnesses. PLoS One. 2009 Apr 4(4):e5251. PMID: 19370153.

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Desipramine reduces stress-activated dynorphin expression and CREB phosphorylation in NAc tissue.

Chartoff EH, Papadopoulou M, MacDonald ML, Parsegian A, Potter D, Konradi C, and Carlezon, WA. Jr. Desipramine reduces stress-activated dynorphin expression and CREB phosphorylation in NAc tissue. 2009 Mar;75(3):704-12. Mol Pharmacol. 2009 Mar;75(3):704-12. PMID: 19106229.

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Human olfactory epithelial cells generated in vitro differentiate to express a diversity of neuronal functions. Neuroscience.

Borgmann-Winter KE, Rawson NE, Wang HW, Wang H, MacDonald ML, Ozdener MH, Yee KY, Gomez G, Xu J, Bryant B, Adamek G, Mirza N, Pribitkin E, Hahn CG. Human olfactory epithelial cells generated in vitro differentiate to express a diversity of neuronal functions. Neuroscience. 2009 Jan 23;158(2):642-53. PMID: 18996445.

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Mass spectrometric analysis demonstrates that BODIPY 581/591 C11 overestimates and inhibits oxidative lipid damage

MacDonald ML, Murray IVJ, Axelsen PH. Mass spectrometric analysis demonstrates that BODIPY 581/591 C11 overestimates and inhibits oxidative lipid damage. Free Radicals in Biology and Medicine. 2007 May 1;42(9):1392-7. PMID: 17395012.

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Isolation Rearing and Hyperlocomotion are Associated with Reduced Immediate Early Gene Expression Levels in the Medial Prefrontal Cortex.

Levine JB, Youngs RM, MacDonald ML, Chu M, Leeder AD, Konradi C. Isolation Rearing and Hyperlocomotion are Associated with Reduced Immediate Early Gene Expression Levels in the Medial Prefrontal Cortex. Neuroscience. 2007 Mar 2;145(1):42-55. PMID: 17239545.

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Differences in lymphocyte electron transport gene expression levels between bipolar subjects and normal controls in response to glucose deprivation stress.

Naydenov AV*, MacDonald ML*. Onger D, Konradi C. Differences in lymphocyte electron transport gene expression levels between bipolar subjects and normal controls in response to glucose deprivation stress. Archives of General Psychiatry. 2007 May 64(5):555-64. PMID: 17485607.

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Decrease in Creatine Kinase Messenger RNA Expression in the Hippocampus and Dorsolateral Prefrontal Cortex in Bipolar Disorder.

MacDonald ML, Naydenov A, Matzilevich D, Konradi C. Decrease in Creatine Kinase Messenger RNA Expression in the Hippocampus and Dorsolateral Prefrontal Cortex in Bipolar Disorder. Bipolar Disorder. 2006 June 8(3):255-64. PMID: 16696827.

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Antipsychotic drugs elevate mRNA levels of presynaptic proteins in the frontal cortex of the rat.

MacDonald ML, Eaton M, Dudman T, Konradi K. Antipsychotic drugs elevate mRNA levels of presynaptic proteins in the frontal cortex of the rat. Biological Psychiatry. 2005 May 1;57(9):1041-51. PMID: 15860345.

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Discovery of novel phenolic antioxidants as inhibitors of vascular cell adhesion molecule-1 expression for use in chronic inflammatory diseases.

Meng CQ, Somers PK, Hoong LK, Zheng XS, Ye Z, Worsencroft KJ, Simpson JE, Hotema MR, Weingarten MD, MacDonald ML, Hill RR, Marino EM, Suen KL, Luchoomun J, Kunsch C, Landers LK, Stefanopoulos D, Howard RB, Sundell CL, Saxena U, Wasserman MA, Sikorski JA. Discovery of novel phenolic antioxidants as inhibitors of vascular cell adhesion molecule-1 expression for use in chronic inflammatory diseases. J Med Chem. 2004 Dec 2;47(25):6420-32. PMID: 15566311.

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Molecular Evidence for Mitochondrial Dysfunction in Bipolar Disorder. Archives of General Psychiatry.

Konradi C, Eaton M, MacDonald ML, Walsh J, Benes F, Heckers S. Molecular Evidence for Mitochondrial Dysfunction in Bipolar Disorder. Archives of General Psychiatry. 2004 March 61(3) 300-308. PMID: 14993118.

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